سال 19، شماره 1 - ( بهمن - اسفند 1403 )                   جلد 19 شماره 1 صفحات 1-1 | برگشت به فهرست نسخه ها

XML English Abstract Print


Download citation:
BibTeX | RIS | EndNote | Medlars | ProCite | Reference Manager | RefWorks
Send citation to:

Kazemi M, Saniee P, Ramezani M, Ghadersoltani P, Najafi-disfani M. Investigating Culturable Bacterial Profile in Gastritis and Gastric Atrophy: Implications for Microbiome Research. Iran J Med Microbiol 2025; 19 (1) :1-1
URL: http://ijmm.ir/article-1-2538-fa.html
Investigating Culturable Bacterial Profile in Gastritis and Gastric Atrophy: Implications for Microbiome Research. مجله میکروب شناسی پزشکی ایران. 1403; 19 (1) :1-1

URL: http://ijmm.ir/article-1-2538-fa.html


چکیده:   (132 مشاهده)

 

     
نوع مطالعه: مقاله پژوهشی | موضوع مقاله: باکتری شناسی پزشکی
دریافت: 1403/9/27 | پذیرش: 1403/12/11 | انتشار الکترونیک: 1404/1/10

فهرست منابع
1. Kotthapalli P, Archer AC. An Introduction to the Human Microbiome. InHuman Microbiome: Techniques, Strategies, and Therapeutic Potential. 2024. pp. 1-23. Singapore: Springer Nature Singapore. [DOI:10.1007/978-981-97-3790-1_1]
2. Sender R, Fuchs S, Milo R. Revised estimates for the number of human and bacteria cells in the body. PLoS Biol. 2016;14(8):e1002533. [DOI:10.1371/journal.pbio.1002533] [PMID] [PMCID]
3. Nardone G, Compare D. The human gastric microbiota: Is it time to rethink the pathogenesis of stomach diseases?. United European Gastroenterol J. 2015;3(3):255-60. [DOI:10.1177/2050640614566846] [PMID] [PMCID]
4. Hou K, Wu ZX, Chen XY, Wang JQ, Zhang D, Xiao C, et al. Microbiota in health and diseases. Signal Transduct Target Ther. 2022;7(1):135. [DOI:10.1038/s41392-022-00974-4] [PMID] [PMCID]
5. Yang J, Zhou X, Liu X, Ling Z, Ji F. Role of the gastric microbiome in gastric cancer: from carcinogenesis to treatment. Front Microbiol. 2021;12:641322. [DOI:10.3389/fmicb.2021.641322] [PMID] [PMCID]
6. Wang S, Cui J, Jiang S, Zheng C, Zhao J, Zhang H, et al. Early life gut microbiota: consequences for health and opportunities for prevention. Crit Rev Food Sci Nutr. 2024;64(17):5793-817. [DOI:10.1080/10408398.2022.2158451] [PMID]
7. Aggarwal N, Kitano S, Puah GR, Kittelmann S, Hwang IY, Chang MW. Microbiome and human health: current understanding, engineering, and enabling technologies. Chem Rev. 2022;123(1):31-72. [DOI:10.1021/acs.chemrev.2c00431] [PMID] [PMCID]
8. Marshall B, Warren JR. Unidentified curved bacilli in the stomach of patients with gastritis and peptic ulceration. Lancet. 1984;323(8390):1311-5. [DOI:10.1016/S0140-6736(84)91816-6] [PMID]
9. Zhou S, Li C, Liu L, Yuan Q, Miao J, Wang H, et al. Gastric microbiota: an emerging player in gastric cancer. Front Microbiol. 2023;14:1130001. [DOI:10.3389/fmicb.2023.1130001] [PMID] [PMCID]
10. Liu Z, Zhang D, Chen S. Unveiling the gastric microbiota: implications for gastric carcinogenesis, immune responses, and clinical prospects. J Exp Clin Cancer Res. 2024;43(1):118. [DOI:10.1186/s13046-024-03034-7] [PMID] [PMCID]
11. Cheng HC, Yang YJ, Yang HB, Tsai YC, Chang WL, Wu CT, et al. Evolution of the Correa's cascade steps: A long-term endoscopic surveillance among non-ulcer dyspepsia and gastric ulcer after H. pylori eradication. J Formos Med Assoc. 2023;122(5):400-10. [DOI:10.1016/j.jfma.2022.11.008] [PMID]
12. Xi J, Li Y, Zhang H, Bai Z. Dynamic variations of the gastric microbiota: Key therapeutic points in the reversal of Correa's cascade. Int J Cancer. 2023;152(6):1069-84. [DOI:10.1002/ijc.34264] [PMID]
13. Elseweidy MM. Brief review on the causes, diagnosis and therapeutic treatment of gastritis disease. Altern Integr Med. 2017;6(1):1-6. [DOI:10.4172/2327-5162.1000231]
14. Conti L, Borro M, Milani C, Simmaco M, Esposito G, Canali G, et al. Gastric microbiota composition in patients with corpus atrophic gastritis. Dig Liver Dis. 2021;53(12):1580-7. [DOI:10.1016/j.dld.2021.05.005] [PMID]
15. Engstrand L, Graham DY. Microbiome and gastric cancer. Dig Dis Sci. 2020;65(3):865-73. [DOI:10.1007/s10620-020-06101-z] [PMID] [PMCID]
16. Schulz C, Schütte K, Mayerle J, Malfertheiner P. The role of the gastric bacterial microbiome in gastric cancer: Helicobacter pylori and beyond. Therap Adv Gastroenterol. 2019;12:1756284819894062. [DOI:10.1177/1756284819894062] [PMID] [PMCID]
17. Duan X, Chen P, Xu X, Han M, Li J. Role of gastric microorganisms other than helicobacter pylori in the development and treatment of gastric diseases. Biomed Res Int. 2022;2022(1):6263423. [DOI:10.1155/2022/6263423] [PMID] [PMCID]
18. Hu YL, Pang W, Huang Y, Zhang Y, Zhang CJ. The gastric microbiome is perturbed in advanced gastric adenocarcinoma identified through shotgun metagenomics. Front Cell Infect Microbiol. 2018;8:433. [DOI:10.3389/fcimb.2018.00433] [PMID] [PMCID]
19. Jeong S, Liao YT, Tsai MH, Wang YK, Wu IC, Liu CJ, et al. Microbiome signatures associated with clinical stages of gastric Cancer: whole metagenome shotgun sequencing study. BMC Microbiol. 2024;24(1):139. [DOI:10.1186/s12866-024-03219-2] [PMID] [PMCID]
20. Tidjani Alou M, Naud S, Khelaifia S, Bonnet M, Lagier JC, Raoult D. State of the art in the culture of the human microbiota: new interests and strategies. Clin Microbiol Rev. 2020;34(1):10-128. [DOI:10.1128/CMR.00129-19] [PMID] [PMCID]
21. Howe S, Liu Z, Zuo B, Zhao J. Culturomics: A critical approach in studying the roles of human and animal microbiota. Anim Nutr. 2024;1:e6. [DOI:10.1017/anr.2024.6]
22. Chen L, An Y, Huang K, Wang J, Zhang Y, Wang J. Culturomics: Bringing culture back to the forefront for effective gastrointestinal bacterial capture. Anim Nutr. 2024;1:e12. [DOI:10.1017/anr.2024.17]
23. Lagier JC, Hugon P, Khelaifia S, Fournier PE, La Scola B, Raoult D. The rebirth of culture in microbiology through the example of culturomics to study human gut microbiota. Clin Microbiol Rev. 2015;28(1):237-64. [DOI:10.1128/CMR.00014-14] [PMID] [PMCID]
24. Matar G, Bilen M. Culturomics, a potential approach paving the way toward bacteriotherapy. Curr Opin Microbiol. 2022;69:102194. [DOI:10.1016/j.mib.2022.102194] [PMID]
25. Peixoto A, Silva M, Pereira P, Macedo G. Biopsies in gastrointestinal endoscopy: when and how. GE Port J Gastroenterol. 2016;23(1):19-27. [DOI:10.1016/j.jpge.2015.07.004] [PMID] [PMCID]
26. Barkun A, Liu J, Carpenter S, Chotiprasidhi P, Chuttani R, Ginsberg G, et al. Update on endoscopic tissue sampling devices. Gastrointest Endosc. 2006;63(6):741-5. [DOI:10.1016/j.gie.2006.02.041] [PMID]
27. Gibson JA, Odze RD. Tissue sampling, specimen handling, and laboratory processing. In Clinical Gastrointestinal Endoscopy. Third Ed. 2019. pp. 51-68. Amsterdam, Netherlands: Elsevier. [DOI:10.1016/B978-0-323-41509-5.00005-0] [PMCID]
28. Diakite A, Dubourg G, Dione N, Afouda P, Bellali S, Ngom II, et al. Optimization and standardization of the culturomics technique for human microbiome exploration. Sci Rep. 2020;10(1):9674. [DOI:10.1038/s41598-020-66738-8] [PMID] [PMCID]
29. Frank JA, Reich CI, Sharma S, Weisbaum JS, Wilson BA, Olsen GJ. Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes. Appl Environ Microbiol. 2008;74(8):2461-70. [DOI:10.1128/AEM.02272-07] [PMID] [PMCID]
30. Conti L, Annibale B, Lahner E. Autoimmune gastritis and gastric microbiota. Microorganisms. 2020;8(11):1827. [DOI:10.3390/microorganisms8111827] [PMID] [PMCID]
31. Nardone G, Compare D, Rocco A. A microbiota-centric view of diseases of the upper gastrointestinal tract. Lancet Gastroenterol Hepatol. 2017;2(4):298-312. [DOI:10.1016/S2468-1253(16)30108-X] [PMID]
32. Xu MQ, Pan F, Peng LH, Yang YS. Advances in the isolation, cultivation, and identification of gut microbes. Mil Med Res. 2024;11(1):34. [DOI:10.1186/s40779-024-00534-7] [PMID] [PMCID]
33. Rajagopal M, Walker S. Envelope Structures of Gram-Positive Bacteria. In: Bagnoli, F., Rappuoli, R. (eds) Protein and Sugar Export and Assembly in Gram-positive Bacteria . Current Topics in Microbiology and Immunology, vol 404. 2016. pp. 1-44. Cham, Switzerland: Springer. [DOI:10.1007/82_2015_5021] [PMID] [PMCID]
34. Rajilic‐Stojanovic M, Figueiredo C, Smet A, Hansen R, Kupcinskas J, Rokkas T, et al. Systematic review: gastric microbiota in health and disease. Aliment Pharmacol Ther. 2020;51(6):582-602. [DOI:10.1111/apt.15650] [PMID]
35. von Martels JZ, Sadabad MS, Bourgonje AR, Blokzijl T, Dijkstra G, Faber KN, et al. The role of gut microbiota in health and disease: In vitro modeling of host-microbe interactions at the aerobe-anaerobe interphase of the human gut. Anaerobe. 2017;44:3-12. [DOI:10.1016/j.anaerobe.2017.01.001] [PMID]
36. Huus KE, Ley RE. Blowing hot and cold: body temperature and the microbiome. Msystems. 2021;6(5):10-128. [DOI:10.1128/msystems.00707-21] [PMID] [PMCID]
37. Li Z, Quan G, Jiang X, Yang Y, Ding X, Zhang D, et al. Effects of metabolites derived from gut microbiota and hosts on pathogens. Front Cell Infect Microbiol. 2018;8:314. [DOI:10.3389/fcimb.2018.00314] [PMID] [PMCID]
38. Otto M. Staphylococci in the human microbiome: the role of host and interbacterial interactions. Curr Opin Microbiol. 2020;53:71-7. [DOI:10.1016/j.mib.2020.03.003] [PMID]
39. Cella CA, Ciardiello D, Gervaso L, van Laarhoven H, Nezi L, Catozzi C, et al. Role of the microbiome in the development and treatment of gastric cancer: an overview of the biological and clinical landscape. ESMO Gastrointest Oncol. 2024;4:100048. [DOI:10.1016/j.esmogo.2024.100048]
40. Carbonne C, Chadi S, Kropp C, Molimard L, Chain F, Langella P, et al. Ligilactobacillus salivarius CNCM I-4866, a potential probiotic candidate, shows anti-inflammatory properties in vitro and in vivo. Front Microbiol. 2023;14:1270974. [DOI:10.3389/fmicb.2023.1270974] [PMID] [PMCID]
41. Liu J, Xue Y, Zhou L. Detection of gastritis-associated pathogens by culturing of gastric juice and mucosa. Int J Clin Exp Pathol. 2018;11(4):2214.
42. Jiang X, Peng L, Zhang L, Li Z, Zhou T, Zhang J, et al. Gastric microbiota and its role in gastric carcinogenesis. Malignancy Spectr. 2024;1(1):2-14. [DOI:10.1002/msp2.15]
43. Wang M, Yang G, Tian Y, Zhang Q, Liu Z, Xin Y. The role of the gut microbiota in gastric cancer: the immunoregulation and immunotherapy. Front Immunol. 2023;14:1183331. [DOI:10.3389/fimmu.2023.1183331] [PMID] [PMCID]
44. Delgado S, Cabrera-Rubio R, Mira A, Suárez A, Mayo B. Microbiological survey of the human gastric ecosystem using culturing and pyrosequencing methods. Microb Ecol. 2013;65:763-72. [DOI:10.1007/s00248-013-0192-5] [PMID]
45. Engstrand L, Lindberg M. Helicobacter pylori and the gastric microbiota. Best Pract Res Clin Gastroenterol. 2013;27(1):39-45. [DOI:10.1016/j.bpg.2013.03.016] [PMID]
46. Ianiro G, Molina‐Infante J, Gasbarrini A. Gastric microbiota. Helicobacter. 2015;20:68-71. [DOI:10.1111/hel.12260] [PMID]
47. Guo Q, Qin H, Liu X, Zhang X, Chen Z, Qin T, et al. The emerging roles of human gut microbiota in gastrointestinal cancer. Front Immunol. 2022;13:915047. [DOI:10.3389/fimmu.2022.915047] [PMID] [PMCID]
48. Shi XJ, Wei Y, Ji B. Systems biology of gastric cancer: Perspectives on the omics-based diagnosis and treatment. Front Mol Biosci. 2020;7:203. [DOI:10.3389/fmolb.2020.00203] [PMID] [PMCID]
49. Marcos-Zambrano LJ, Karaduzovic-Hadziabdic K, Loncar Turukalo T, Przymus P, Trajkovik V, Aasmets O, et al. Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment. Front Microbiol. 2021;12:634511. [DOI:10.3389/fmicb.2021.634511] [PMID] [PMCID]
50. Li ZP, Liu JX, Lu LL, Wang LL, Xu L, Guo ZH, et al. Overgrowth of Lactobacillus in gastric cancer. World J Gastrointest Oncol. 2021;13(9):1099. [DOI:10.4251/wjgo.v13.i9.1099] [PMID] [PMCID]

ارسال نظر درباره این مقاله : نام کاربری یا پست الکترونیک شما:
CAPTCHA

بازنشر اطلاعات
Creative Commons License این مقاله تحت شرایط Creative Commons Attribution-NonCommercial 4.0 International License قابل بازنشر است.

کلیه حقوق این وب سایت متعلق به مجله میکروب شناسی پزشکی ایران می باشد.

طراحی و برنامه نویسی : یکتاوب افزار شرق   ناشر: موسسه فرنام

© 2025 CC BY-NC 4.0 | Iranian Journal of Medical Microbiology

Designed & Developed by : Yektaweb Publishr: Farname Inc.