<?xml version="1.0" encoding="utf-8"?>
<journal>
<title>Iranian Journal of Medical Microbiology</title>
<title_fa>مجله میکروب شناسی پزشکی ایران</title_fa>
<short_title>Iran J Med Microbiol</short_title>
<subject>Medical Sciences</subject>
<web_url>http://ijmm.ir</web_url>
<journal_hbi_system_id>1</journal_hbi_system_id>
<journal_hbi_system_user>admin</journal_hbi_system_user>
<journal_id_issn>1735-8612</journal_id_issn>
<journal_id_issn_online>2345-4342</journal_id_issn_online>
<journal_id_pii>8</journal_id_pii>
<journal_id_doi>10.30699/ijmm</journal_id_doi>
<journal_id_iranmedex></journal_id_iranmedex>
<journal_id_magiran></journal_id_magiran>
<journal_id_sid>14</journal_id_sid>
<journal_id_nlai>8888</journal_id_nlai>
<journal_id_science>13</journal_id_science>
<language>en</language>
<pubdate>
	<type>jalali</type>
	<year>1403</year>
	<month>5</month>
	<day>1</day>
</pubdate>
<pubdate>
	<type>gregorian</type>
	<year>2024</year>
	<month>8</month>
	<day>1</day>
</pubdate>
<volume>18</volume>
<number>4</number>
<publish_type>online</publish_type>
<publish_edition>1</publish_edition>
<article_type>fulltext</article_type>
<articleset>
	<article>


	<language>en</language>
	<article_id_doi></article_id_doi>
	<title_fa></title_fa>
	<title>Phylogenetic Analysis of &lt;i&gt;Scopulariopsis Brevicaulis&lt;/i&gt; Isolated From Diabetic Patients in Kirkuk City, Iraq</title>
	<subject_fa>قارچ شناسی پزشکی</subject_fa>
	<subject>Medical Mycology</subject>
	<content_type_fa>مقاله پژوهشی</content_type_fa>
	<content_type>Original Research Article</content_type>
	<abstract_fa></abstract_fa>
	<abstract>&lt;p style=&quot;text-align: justify;&quot;&gt;&lt;span style=&quot;font-family:Times New Roman;&quot;&gt;&lt;span style=&quot;font-size:16px;&quot;&gt;&lt;b&gt;&lt;span style=&quot;background:#1f497d&quot;&gt;&lt;span style=&quot;color:white&quot;&gt;&lt;span style=&quot;letter-spacing:-.1pt&quot;&gt;Background and Aim:&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/b&gt; &lt;i&gt;&lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt;Scopulariopsis brevicaulis&lt;/span&gt;&lt;/span&gt;&lt;/i&gt;&lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt; (&lt;i&gt;S. brevicaulis&lt;/i&gt;) is an opportunistic &lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;color:black&quot;&gt;pathogen causing&lt;/span&gt;&lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt; both &lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;color:black&quot;&gt;localized&lt;/span&gt;&lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt; and systemic infections. Recent studies indicated DNA sequence variation among &lt;i&gt;S. brevicaulis&lt;/i&gt; isolates from different clinical sources. In this study we aimed to isolate and diagnose &lt;i&gt;S. brevicaulis&lt;/i&gt; from nail and skin samples of diabetic patients and investigate their phylogenetic diversity based on the internal transcribed spacer 1 (ITS) sequencing&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;color:black&quot;&gt;.&lt;/span&gt;&lt;br&gt;
&lt;b&gt;&lt;span style=&quot;background:#1f497d&quot;&gt;&lt;span style=&quot;color:white&quot;&gt;&lt;span style=&quot;letter-spacing:-.1pt&quot;&gt;Materials and Methods:&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/b&gt; &lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt;Fifty nail and skin samples were collected from diabetic patients suffering from skin lesions. Conventional diagnostic methods were &lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;color:black&quot;&gt;utilized&lt;/span&gt;&lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt; to identify the bacterial and fungal isolates. Fungal DNA was extracted and ITS 1 region was amplified by PCR and sequenced using Sanger method. Multiple sequence alignment and phylogenetic analysis were conducted using Clustal W and MEGA software. Finally, antifungal susceptibility test was performed by disc diffusion method&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;color:black&quot;&gt;. &lt;/span&gt;&lt;br&gt;
&lt;b&gt;&lt;span style=&quot;background:#1f497d&quot;&gt;&lt;span style=&quot;color:white&quot;&gt;&lt;span style=&quot;letter-spacing:-.1pt&quot;&gt;Results:&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/b&gt; &lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt;Based on the culture, microscopic evaluation, and biochemical tests, various types of bacteria and fungi were isolated. Among 50 nail and skin samples, 25 fungal isolates (50%) and 5 bacterial isolates (10%) were recovered. Interestingly, one of the fungal isolates was identified as &lt;i&gt;Scopulariopsis brevicaulis&lt;/i&gt;. This isolate was associated with a clinical case involving a 52-year-old male. Phylogenetic analysis of the ITS region showed our isolate (&lt;i&gt;Scopulariopsis brevicaulis&lt;/i&gt;) closely matched and clustered in the same clade as those reported in the US, differing from those reported in Iraq (Basrah), Iran, and Turkey. Furthermore, our isolate exhibited a multi-drug resistance pattern against antifungal agents&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;color:black&quot;&gt;.&lt;/span&gt;&lt;br&gt;
&lt;b&gt;&lt;span style=&quot;background:#1f497d&quot;&gt;&lt;span style=&quot;color:white&quot;&gt;&lt;span style=&quot;letter-spacing:-.1pt&quot;&gt;Conclusion:&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/b&gt; &lt;span lang=&quot;EN-GB&quot;&gt;&lt;span style=&quot;color:black&quot;&gt;This study highlights the importance of identifying &lt;i&gt;S. brevicaulis&lt;/i&gt; in diabetic patients due to its multi-drug resistance. DNA sequencing and phylogenetic analysis revealed genetic divergence from the strains within the same country and other different countries&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;color:black&quot;&gt;.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/p&gt;</abstract>
	<keyword_fa></keyword_fa>
	<keyword>Diabetes, Fungal infection, Iraq, Onychomycosis, Phylogenetic, Scopulariopsis</keyword>
	<start_page>247</start_page>
	<end_page>256</end_page>
	<web_url>http://ijmm.ir/browse.php?a_code=A-10-2618-1&amp;slc_lang=en&amp;sid=1</web_url>


<author_list>
	<author>
	<first_name>Bari</first_name>
	<middle_name></middle_name>
	<last_name>Lateef Mohammed</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>dr.pary.mycology@uokirkuk.edu.iq</email>
	<code>100319475328460029905</code>
	<orcid>100319475328460029905</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Biology, College of Science, University of Kirkuk, Kirkuk, Iraq</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Iman</first_name>
	<middle_name></middle_name>
	<last_name>Tajer Abdullah</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>imantajer@uokirkuk.edu.iq</email>
	<code>100319475328460029906</code>
	<orcid>100319475328460029906</orcid>
	<coreauthor>Yes
</coreauthor>
	<affiliation>Department of Biology, College of Science, University of Kirkuk, Kirkuk, Iraq</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Sanaa</first_name>
	<middle_name></middle_name>
	<last_name>Hussein Mohammed</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>sanaabioyl@uokirkuk.edu.iq</email>
	<code>100319475328460029907</code>
	<orcid>100319475328460029907</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Biology, College of Science, University of Kirkuk, Kirkuk, Iraq</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Shakhawan</first_name>
	<middle_name></middle_name>
	<last_name>Beebany</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>sh.beebany@uokirkuk.edu.iq</email>
	<code>100319475328460029908</code>
	<orcid>100319475328460029908</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Department of Chemistry, College of Science, University of Kirkuk, Kirkuk, Iraq</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


</author_list>


	</article>
</articleset>
</journal>
